Thrombosis |
From Laboratoire dHémostase and Service des Maladies Vasculaires, Hôpital BroussaisAP-HP, and Unité INSERM 428, Faculté de Pharmacie, Université René Descartes, Paris (E.A., J.E., J.-N.F., M.A.); Société bioMérieux, Marcy-lEtoile (V.B.); and Unité INSERM 525, Paris (V.N., F.C.), France; and the MONICA Project: Belfast, Northern Ireland, UK (A.E.); Glasgow, Scotland, UK (C.M.); and Strasbourg (D.A.), Lille (G.L.), and Toulouse (J.-B.R.), France.
Correspondence to Dr Emmanuel Arnaud, Laboratoire dHémostase, Hôpital Broussais, 96 rue Didot, F-75674 Paris Cedex 14, France. E-mail emmanuel.arnaud{at}brs.ap-hop-paris.fr
| Abstract |
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Key Words: tissue factor gene polymorphisms venous thromboembolism myocardial infarction
| Introduction |
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The human TF gene spans 12.4 kb and is organized into 6 exons separated
by 5 introns.4 The promoter domain has been fully
sequenced 798 bp upstream from the transcription start site. The
mechanism underlying transcriptional activation of TF in human
monocytes and endothelial cells has been extensively
studied.5 The proximal promoter domain encompasses
consensus binding sites for the transcription factors
activator protein-1, nuclear factor-
B, and
Egr-1/Sp1.6 7 In endothelial cells,
mononuclear phagocytes, and smooth muscle cells, TF gene transcription
can be induced by growth factors,2 8 mechanical
injury,9 10 heart ischemia and
reperfusion,11 and shear stress,12 which
define the TF gene as a "primary response" gene.
It is generally accepted that atherosclerotic plaque rupture exposes vascular TF to flowing blood, leading to coagulation activation, thrombosis, and subsequent artery occlusion. In human carotid plaque, TF mRNA is expressed in macrophage foam cells and smooth muscle cells.13 Interestingly, TF activity was recently shown to be expressed on shed membrane microparticles arising from apoptosis in atherosclerotic carotid plaque.14 Quantification of TF in coronary atherosclerotic plaque suggests that high levels of TF are highly thrombogenic.15 16 17 The role of circulating TF may also be important, as suggested by increased expression of TF in monocytes from patients with unstable angina18 and increased plasma TF levels in patients with acute coronary syndromes.19 The presence of active circulating TF in normal subjects is reflected by the generation of prothrombin fragment 1+2, which is released after factor X activation by the TF pathway.20 21 The potentially important role of circulating TF in thrombosis was recently supported by the observation that encrypted leukocyte TF can become rapidly available to generate thrombosis in an experimental model.22 Taken together, these observations argue for an important role of TF in both arterial and venous thrombosis.
Genetic polymorphisms associated with modifications of the circulating levels or activities of coagulation proteins or with variations in platelet receptor expression have been suggested to favor thrombosis.23 24 25 26 27 28 Sequence variations in the TF gene promoter could modulate TF expression in endothelial cells, circulating monocytes, and macrophages.
We extensively screened the TF gene promoter over 2732 nucleotides in 40 unrelated subjects and identified 6 novel polymorphisms. The frequencies of these 6 polymorphisms were analyzed in 2 case-control studies, called ECTIM (Etude Cas-Témoins de lInfarctus du Myocarde) and PATHROS (Paris Thrombosis case-control Study), to determine whether the TF promoter genotype is linked to the risk of myocardial infarction (MI) and venous thromboembolism (VTE), respectively.
| Methods |
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Nested-PCR products were cloned with the TA kit (Invitrogen). Clones containing the insert were then incubated in 2 mL of Luria-Bertani medium containing 50 mg/mL ampicillin at 37°C overnight. The culture medium (1.5 mL) was then centrifuged for 10 minutes at 1000g and 4°C, and the sediment was dissolved in GTE medium (50 mmol/L glucose; 25 mmol/L Tris HCl, pH 8; and 10 mmol/L EDTA) and added to 1% SDS and 0.2 mol/L NaOH. Bacterial DNA was insolubilized with 2.55 mol/L potassium acetate and 100% acetic acid, pH 4.8. After centrifugation at 18 000g for 5 minutes at 4°C, the supernatant was mixed with 3 mL of RNase (Boehringer Mannheim) at 37°C for 60 minutes. Plasmid DNA containing the insert was then purified by means of a classic phenol-chloroform method.
Each plasmid DNA was directly sequenced with the universal M13 reverse
primer and M13 forward primer by using the ABI prism dye terminator
cycle sequencing ready-reaction kit (Perkin Elmer) under conditions
recommended by the manufacturer and was then loaded onto a 377 ABI
prism apparatus (Perkin Elmer). With the use of different
primers (listed in Table 1
) in different
steps, the promoter sequence was determined up to
nucleotide -2718.
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Screening for Polymorphisms
The 5' regulatory region of the TF gene was screened by direct
sequencing by using the PE protocol described above on a 377 ABI
prism device. Forty alleles from 40 unrelated individuals (blood
donors) were first amplified as 9 different fragments, as described in
Table 1
. The PCR amplification mixture contained 10 pmol of each
primer, 200 µmol/L dNTP, 10 mmol/L Tris HCl (pH 8.8),
10 mmol/L KCl, 1.0 mmol/L MgCl2, 0.1%
Triton X-100, 0.2 mg/mL BSA, 0.25 U of Taq polymerase (Super
Taq, ATGC Biotechnologie), and 200 ng of DNA. The reaction was run in a
Techne PHC-3 thermal cycler (Techne, Ozyme) with a 5-minute
denaturation at 95°C followed by 35 cycles of a 1-minute denaturation
at 95°C, 1-minute annealing at a temperature given in Table 1
, and 1
-minute extension at 72°C. PCR fragments were then purified and
sequenced in both directions by using amplification primers.
Genotyping
DNA was prepared from white blood cells by using a standard
technique29 and was stored at 4°C until
analysis. The factor V Arg506Gln and prothrombin gene G20210A
mutations were identified as previously described.30
All of the subjects participating in the ECTIM and PATHROS studies were
genotyped by using allele-specific
oligonucleotides (ASOs).31 The PCR
product (15 µL) was denatured in 150 µL of 0.5 mol/L NaOH and
1.5 mol/L NaCl and blotted onto nylon membranes (ICN). ASOs for each
allele were labeled with 50 µCi of
[
-32]ATP by T4 kinase (Biolabs, Ozyme) at
37°C for 20 minutes. Membranes were incubated for 4 hours with 20
pmol of labeled probe at a melting temperature of -5°C, washed twice
at room temperature in 1x SSC for 5 minutes followed by 5 minutes in
0.5x SSC at melting temperature-3°C, and autoradiographed overnight
at -80°C with an intensifying screen. The ASOs are listed in
Table 1
.
The TF concentration was measured with the Imubind tissue factor ELISA kit (American Diagnostica Inc) in a subsample of PATHROS controls homozygous for the D (n=28) and I (n=28) alleles and who were matched for age, sex, smoking status, and oral contraceptive use in women.
Study Populations
ECTIM is a study of patients with MI from regions covered by
World Health Organization MONICA (MONItoring trends and determinants in
CArdiovascular disease) registers and controls
representative of each geographic area. The following
resisters were used in the ECTIM study: Belfast (northern Ireland);
Glasgow (Scotland); and Lille, Strasbourg, and Toulouse (France). The
design of the study has been described in detail
elsewhere.32 In brief, men aged 25 to 64 and women aged 25
to 69 years were recruited between 1988 and 1990 for the original ECTIM
study and from 1997 to 1998 for its extension in Belfast and Glasgow.
Cases were recruited 3 to 9 months after the event and had to meet the
MONICA criteria for definite acute MI (category I). Controls were
randomly recruited from the same geographic areas as the cases (lists
of general practitioners in the United Kingdom and
electoral rolls in France), and stratification by age was used to
approximately match the age distribution of the control subjects with
that of the cases. The participants were white; the parents of the
cases and controls had to have been born in the same region; and their
4 grandparents had to have been born in Europe. All subjects gave their
informed consent, completed a questionnaire, and gave a venous blood
sample.
PATHROS was started in our center in November 1995 to identify genetic risk factors for VTE.30 Two hundred fifty-five patients <61 years old were included. All had had at least 1 episode of objectively diagnosed deep venous thrombosis (compression and ventilation lung ultrasonography or venography) and/or pulmonary embolism (perfusion and ventilation lung scan, conventional pulmonary angiography, or computed tomographic angiography).
The controls were 1214 healthy subjects matched for age and sex and recruited from a health center to which they had been referred for a routine checkup. On the basis of a medical questionnaire, subjects with a history of VTE, arterial disease (stroke, MI, angina, or peripheral vascular disease) or known malignancy were excluded. All subjects gave their informed consent, and the study was approved by the local ethics committee.
Statistical Analysis
Data were analyzed by using SAS statistical
software (SAS Institute Inc). The clinical characteristics of the cases
and controls were compared by using a
2 test
with 1 df except for age, which was tested by ANOVA.
Hardy-Weinberg equilibrium was tested for by
2
with 1 df separately in cases and controls from the
different recruitment centers. Allele frequencies were deduced from
the genotype frequencies, and differences between the cases and
controls were identified by means of a
2 test
(1 df). In the ECTIM study, controls with coronary
heart disease were excluded.
The odds ratios (ORs) and 95% confidential intervals (95% CIs) associated with the -1208 ID and DD genotypes were calculated by using a logistic regression procedure (SAS PROC LOGIST), together with the OR associated with at least 1 copy of the D allele. The homogeneity of the OR associated with -1208 I/D was tested between men and women and across age by entering the corresponding interaction terms in the logistic regression equation. Differences in TF levels according to the -1208 I/D genotype were identified by ANOVA. Differences were considered significant when P<0.05
| Results |
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T), -1442 (G
C), -1322 (C
T), -1208 (D
I), -603 (A
G),
and -21 (C
T). The -1208 polymorphism was a deletion/insertion
(D/I) of 18 nucleotides (5'-none-AGCTAAACGAGATATGTA-3'). To
determine their frequencies and possible haplotypes, all of these
polymorphisms were first investigated in the ECTIM study (1191
cases and 1163 controls). The 4 polymorphisms at positions -1812,
-1322, -1208, and -603 were found to be completely concordant in the
2354 individuals, with 2 haplotypes of similar frequencies: -1812
C/-1322 C/-1208 D/-603 A and -1812 T/-1322 T/-1208 I/-603 G,
designated -1208 D and -1208 I, respectively.
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The other 2 variants observed at positions -21 and -1442 were rare. Only 2 ECTIM controls were heterozygous for the -21 T allele, and 2 MI cases and 3 controls were heterozygous for the -1442 C allele. In the PATHROS study, 1 control was heterozygous for -21 T, and 3 VTE cases were heterozygous for -1442 C. Only the 2 frequent haplotypes were tested for their association with thrombosis.
TF Promoter Genotypes According to MI in the ECTIM Study
and VTE in the PATHROS Study
The characteristics of the patients and controls in the 2 study
populations are shown in Table 2
. In
ECTIM, the mean age (±SD) of the cases and controls was 56.3±8.1
years, versus 57.3±8.0 (P=0.017) in the United Kingdom and
54.0±8.2 and 52.6±8.4 (P=0.014) in France. In the United
Kingdom, where both men and women were included, the cases and controls
were correctly matched for sex. As expected in the United Kingdom and
France, there were significant differences between the cases and
controls regarding the frequencies of smokers and subjects with a
family history of MI. The distribution of the genotypes and
allele frequencies are shown in Table 3
. The frequencies of the
polymorphisms showed no significant deviation from Hardy-Weinberg
equilibrium, in any of the centers, among controls. The overall
genotype and allele frequencies were similar in cases and
control subjects, with an allele -1208 D frequency of
0.516 and 0.505 in cases and controls, respectively. There was no
heterogeneity according to the country of recruitment
nor any sex heterogeneity in the subgroup from the
United Kingdom.
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Given the complete concordance of the 4 polymorphisms in ECTIM,
only 1 polymorphism, -1208 (D
I), was screened in PATHROS. There
was no significant deviation from Hardy-Weinberg equilibrium. The cases
and controls did not differ significantly according to age, sex, or
smoking habit (Table 2
). Oral contraceptive use was
significantly more frequent among the cases than the controls.
Spontaneous thrombosis and recurrent thrombosis occurred in 40.3% and
28.3% of cases, respectively. Pulmonary embolism had been
diagnosed in 31.6% of cases. The frequencies of the 2 most common
genetic risk factors for venous thrombosis, factor V Arg506Gln and
factor II G20210A, were within the expected range for a white
population. Factor V Arg506Gln was observed in 20.7% of cases and
3.5% of controls (P<0.001) and the prothrombin G20210A
mutation in 12.2% and 3.5% (P<0.001), respectively.
The frequency of the -1208 D allele was lower among VTE
cases than among controls (0.480 versus 0.536, P=0.022;
Table 3
). No association with the occurrence of
pulmonary embolism, recurrence, or age at the first
thrombotic event was observed according to genotype. The OR
associated with the presence of at least 1 copy of the -1208
D allele was 0.72 (95% CI, 0.53 to 0.97;
P=0.031), suggesting a weak protective effect of this
allele on VTE (Table 3
). After exclusion of subjects bearing
the factor V Arg506Gln or prothrombin gene G20210A mutation, the OR was
of similar magnitude but was no longer significant (0.75, with 95% CI
0.53 to 1.06; P=0.11).
Because levels of circulating TF might reflect intravascular TF gene
expression, we selected 28 subjects homozygous for the -1208
D haplotype and 28 subjects homozygous for the -1208
insertion among the PATHROS control subjects. The 2 groups were well
matched for age and sex. As shown in Table 4
and Figure 2
, the control subjects homozygous for
allele D had a significantly lower circulating TF
concentration than did subjects homozygous for allele I
(mean of 165.0±66.9 and 124.2±61.5 pg/mL for -1208 II and
-1208 DD, respectively; P=0.021).
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| Discussion |
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It is noteworthy that only 2 major haplotypes, -1208 D and -1208 I, resulted from the combination of 4 polymorphisms in the entire population of >2000 subjects. Complete concordance among polymorphisms within a gene is frequently observed and suggests the existence of ancestral haplotypes having survived to the present time through complex population-historical processes.33
In the ECTIM study population, we found similar haplotype frequencies
in the patients with MI and the control subjects, ruling out the
possibility that 1 of the haplotypes is predisposing individuals to
nonfatal coronary thrombosis. In PATHROS, the -1208 D
haplotype tended to be less frequent in cases than in control subjects,
with an OR of 0.72 associated with the presence of at least 1 copy
(P=0.031). However, the effect was no longer significant
after excluding the 73 patients carrying the factor V Arg506Gln and
factor II G20210A mutations. The weak or absent association between the
TF gene promoter polymorphisms and thrombosis in these 2
case-control studies might be due to the absence of a haplotype effect
on transcription factor binding. Indeed, none of the identified
polymorphisms is located in the proximal promoter region, which has
been shown to drive transcriptional activity.6 34 35
Potential transcription factor binding sites like Sp1, Egr-1,
activator protein-1, and nuclear factor-
B, which are
active in the proximal promoter, were searched for by using the
transcription factor database program36 in the promoter
domain encompassing the polymorphisms. None appeared or was
disrupted by any of the 4 linked polymorphisms.
The lack or a weak effect of TF gene promoter polymorphisms on the risk of thrombosis (nonfatal MI and VTE) does not exclude the possibility that TF interacts with other thrombogenic factors. The baseline circulating TF level, assessed with an ELISA that measures soluble TF and possibly TF associated with microvesicle membranes,14 was significantly lower in subjects bearing two -1208 D alleles than in subjects bearing two -1208 I alleles, with mean values of 124.2±61.5 and 165.0±66.9 pg/mL, respectively (P=0.021). This argues for an effect of the polymorphisms on TF gene expression, but further experiments are required to support or reject this possibility. The lower TF concentration observed in -1208 D homozygotes is in keeping with the weak protective effect observed in patients with VTE.
Because these polymorphisms had little if any effect in a large series of patients with MI or VTE, the moderate increase in circulating TF levels associated with the -1208 I allele might be insufficient to favor thrombosis. Many genetic and circumstantial risk factors could interact in the onset of thrombosis. The polymorphism might play a role in patients with other genetic or acquired risk factors. Larger studies will be needed to check these interactions between TF gene polymorphisms and circumstantial risk factors.
| Acknowledgments |
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Received July 23, 1999; accepted August 31, 1999.
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