Arteriosclerosis, Thrombosis, and Vascular Biology. 2006;26:1207-1214
Published online before print March 16, 2006,
doi: 10.1161/01.ATV.0000217632.98717.a0
(Arteriosclerosis, Thrombosis, and Vascular Biology. 2006;26:1207.)
© 2006 American Heart Association, Inc.
Nitric Oxide and Posttranslational Modification of the Vascular Proteome
S-Nitrosation of Reactive Thiols
Diane E. Handy;
Joseph Loscalzo
From the Department of Medicine, Brigham and Womens Hospital, Harvard Medical School, Boston, Mass.
Correspondence to Joseph Loscalzo, Brigham and Womens Hospital, Harvard Medical School, 75 Francis St, Boston, MA 02115. E-mail jloscalzo{at}partners.org
Series Editor: Joseph Loscalzo Previous Brief Review in this Series:
Kim-Shapiro DB, Schlechter AN, Gladwin MT. Unraveling the reactions of nitric oxide, nitrite, and hemoglobin in physiology and therapeutics. 2006;26:697705.
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Abstract
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Nitric oxide (NO·) is known to exert its effects via
guanylyl cyclase and cyclic GMP- dependent pathways and by cyclic
GMP-independent pathways, including the posttranslational modification
of proteins. Much ongoing research is focused on defining the
mechanisms of NO·-mediated protein modification, the
identity and function of the modified proteins, and the significance
of these changes in health and disease. S-nitrosation or thionitrite
formation has only been found on a limited number of residues
in a subset of proteins in in vitro and in vivo studies. Protein
S-nitrosation also appears to be reversible. There are several
theories about the in vivo S-nitrosating agent, and most suggest
a role for oxidation products of NO· in this process.
Flux in cellular S-nitrosoprotein pools appears to be regulated
by NO· availability and is redox-sensitive. An analysis
of S-nitrosation in candidate proteins has clarified the mechanism
by which NO· regulates enzymatic and cellular functions.
These findings suggest the utility of using proteomic methods
to identify unique targets for protein S-nitrosation to understand
further the molecular mechanisms of the effects of NO·.
Nitric oxide (NO·) is known to exert its effects via guanylyl cyclase and cyclic GMP- dependent pathways and by cyclic GMP-independent pathways, including the posttranslational modification of proteins. Much ongoing research is focused on defining the mechanisms of NO·-mediated protein modification, the identity and function of the modified proteins, and the significance of these changes in health and disease. Specific findings suggest the utility of using proteomic methods to identify unique targets for protein S-nitrosation to understand further the molecular mechanisms of the effects of NO·.
Key Words: endothelial cells nitric oxide posttranslational modification proteomics S-nitrosation
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Introduction
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Nitric oxide (NO·) is produced by many cell types and
has many diverse functions. In the cardiovascular system, NO·
is a key regulator of vascular tone,
1,2 where it is known to
mediate its effects, in part, by binding to the heme moiety
of its effector, soluble guanylyl cyclase, with the subsequent
activation of cyclic GMP-dependent signaling.
3,4 There are many
additional cGMP-independent actions of NO· that rely
on modifications of biomolecules, including the posttranslational
modification of proteins at reactive cysteine residues to form
a thionitrite and the nitration of tyrosine at its
ortho position.
58
Much ongoing research is focused on defining the mechanisms of NO-mediated protein modification, the identity of proteins that are modified, and the significance of these changes in health and disease. Research has focused on these modifications for a number of reasons detailed in this review. Importantly, these changes (eg, S-nitrosation or tyrosine nitration) have each been shown to occur with normal physiological and/or pathophysiological levels of NO·. These modifications have only been found on a limited number of residues in a subset of proteins in in vitro and in vivo studies, suggesting that the modifications do not occur randomly and, therefore, may constitute a signaling event, akin to phosphorylation. Several studies have shown that these modifications can alter protein function, and, at least for S-nitrosation, there is evidence to suggest that this process is reversible.
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Sources of NO· in the Vasculature
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NO· is produced by nitric oxide synthase (NOS) enzymes
as a result of the 2-step oxidation of L-arginine to form NO·
and L-citrulline.
9 Enzyme activity requires the cofactors NADPH,
tetrahydrobiopterin, and flavin for electron transfer.
10,11 Of the 3 known mammalian NOS,
11 endothelial (eNOS) and neuronal
(nNOS) isoforms are constitutively expressed enzymes that require
calcium and calmodulin for their activation.
1214 The
expression of inducible NOS (iNOS) is regulated by transcriptional
activation in response to inflammation and cytokine production.
15 iNOS is a high-flux enzyme highly regulated by substrate (L-arginine)
availability. Phosphorylation, cellular localization, proteinprotein
interactions, and cysteinyl S-nitrosation can also modulate
the activity of NOS enzymes.
Under normal conditions, vascular NO· is derived primarily from eNOS in the endothelial cell. iNOS is primarily expressed in activated mononuclear leukocytes, such as those found in atherosclerotic lesions;16 however, iNOS can also be induced in many cell types, including endothelial and vascular smooth muscle cells, by cytokine stimulation.15,17
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In Vivo Formation of S-Nitrosoproteins
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There are many theories concerning the endogenous agent capable
of S-nitrosation. It is generally believed that higher oxides
of nitrogen mediate S-nitrosation; N
2O
3 is one proposed nitrosating
agent. To form N
2O
3, NO· reacts with O
2 to form the NO
2 intermediate (2 NO· + O
2 
2 NO
2) followed by the reaction
of NO
2 with NO· to form N
2O
3, the nitrosating agent.
18,19 Formation of these nitrogen oxides depend on NO· concentration,
and, thus, these reactions are predicted to occur more readily
in hydrophobic compartments of cells and proteins because of
the relative hydrophobicity of NO· and O
2.
20,21 To account
for S-nitrosation in compartments of cells with low concentrations
of NO·, Jourdheuil et al
22 proposed that nitrosation
of thiols occurs after intermediate oxidation of thiols by nitrogen
dioxide radical (·NO
2) to form a susceptible thiyl radical
(RS·) that can be readily oxidized by NO· or its
oxides. A recent study of p21
ras S-nitrosation provides supporting
evidence for this mechanism, showing that a RAS-S· intermediate
is formed during the in vitro nitrosation of this protein by
reaction with ·NO
2.
23 Other studies suggest a role for
peroxynitrite in the oxidation of cysteines to yield S-nitrosoproteins.
19,24
Direct reactions between NO· and cysteine may also occur via a RSNOH intermediate. These reactions would require inorganic electron acceptors or transition metal centers to catalyze electron removal to form RSNO.25,26 Trans-S-nitrosation is yet another means to transfer NO· from one thiol to another. Evidence exists for the transfer of the S-nitroso group from extracellular to intracellular pools of thiols and between protein S-nitrosothiols and low-molecular-weight thiols2729 (Figure 1). Studies from our group30 and by others31 indicate that protein disulfide isomerase plays a role in the transfer of NO· from extracellular S-nitrosothiols to intracellular thiol pools. Other research has implicated system L amino acid transporters, that contain the light chains LAT1 and LAT2, for cellular uptake of L-S-nitrosocysteine,32,33 thus providing further evidence for a mechanism governing the movement of the S-nitroso group from extracellular to intracellular thiol pools. Once within the cell, S-nitrosothiols either engage in trans-S-nitrosation reactions or undergo reduction via the conversion of S-nitrosoglutathione to glutathione sulfinamide by the formaldehyde dehydrogenase-glutathione pathway.34,35

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Figure 1. Transport of S-nitrosothiols and formation of S-nitrosoproteins. Low- and high-molecular-weight S-nitrosothiols (RSNO, R'SNO and R"SNO) are found in the extracellular and intracellular space. Plasma albumin represents the most abundant S-nitrosated plasma protein (S-NO-albumin) and can be nitrosated by other low- or high-molecular-weight S-nitrosothiols by trans-S-nitrosation. S-NO-albumin can also serve as a source of NO for cysteine (Cys), an abundant low-molecular-weight thiol. S-NO-Cys is readily transported into the cell by the system L-transporters where S-NO-Cys can transfer NO to other low- and high-molecular-weight thiols (R'SH). NO is also transferred into the intracellular space via the action of protein disulfide isomerase at the cell surface. The accumulation of NO and O2 in the cellular membrane may promote the formation of N2O3, a nitrosating agent. RSNO may enter the cell through other as of yet undetermined mechanisms. Various enzyme systems, such as formaldehyde dehydrogenase (FD)34 and cellular glutathione peroxidase (GPx-1), may play a role in regulating some denitrosation/transnitrosation pathways.
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Many questions remain regarding the formation of S-nitrosoproteins in vivo. Experimental evidence suggests that only certain cysteinyl side chains on certain proteins are targeted; however, the biochemical basis for this selectivity is unclear. It has been hypothesized that the microenvironment of the site or the pKA of the cysteinyl group may influence its reactivity and the stability of the S-nitrosated product.36 Others have suggested that S-nitrosation occurs in target proteins that are in proximity to an NO· generator.37 Myeloperoxidase may catalyze the formation of ·NO2 from NO· and H2O2 at the endothelial surface, and may thereby also contribute to S-NO formation in vivo.38,39 A global picture of S-nitrosoproteins and their subcellular localization is necessary to answer these and other questions on this important topic.
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Detection of S-Nitrosoproteins
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The labile properties of the S-NO bond have hindered general
identification of S-nitrosated proteins and the specific cysteinyl
residues that are modified. The S-nitroso bond is subject to
decomposition by light,
40 transition metals,
41 excess thiols,
and antioxidants, including ascorbate.
42 Another confounder
is sample contamination with nitrogen oxides, which can be measured
as NO· by some methods or can cause nitrosation of thiols
during sample preparation. The
Table lists some of the commonly
used methods for S-nitrosoprotein detection.
Photolysis-chemiluminescence is a sensitive method used to identify S-nitrosproteins in biological samples. This method relies on the light-activated cleavage of the S-N bond, followed by detection of NO· gas by chemiluminescence in the presence of ozone.5 Alternatively, S-nitrosoproteins can be detected by ozone-based chemiluminescence after Cu(+)/cysteine43 or acidic tri-iodide44 release of NO·. These assays require highly specialized equipment and are sensitive to nitrite contamination. In addition, NO· may be released from ironnitrosyl complexes and/or O-nitroso and N-nitroso bonds.4447 For accurate measurement of the S-nitrosothiol pool, free thiols must be blocked during sample purification to prevent postisolation S-nitrosation, and acidified sulfanilamide can be used to eliminate nitrite contamination. To distinguish the S-nitrosothiol pool, sequential assays with and without mercuric chloride pretreatment are performed because only the S- NO bond is susceptible to mercuric chloride cleavage. These highly sensitive chemiluminescence assays have mostly been used to quantify S-nitroso content in complex biological samples (eg, cell or tissue extracts).
Alternatively, the Saville reaction is used to release the nitrosonium ion (NO+). This mercury-mediated decomposition of S-NO is followed by a colorimetric or fluorimetric method to measure nitrogen oxide products. Commonly, the Griess reaction is used to produce a nitrogen oxide-dependent colored azo complex or, alternatively, 2,3-diaminonaphthalene(DAN) is used to form a highly fluorescent product to measure indirectly NO· derived from S-nitrosated thiols (reviewed in Ref. 48). Of these methods, the DAN assay is the more sensitive method to measure S-nitrosated thiols.49 The Saville-Griess or DAN reactions have been used to quantify levels of S-nitrosation in complex biological samples but have also been used in combination with targeted protein immunoprecipitation to quantify levels of protein-specific S-nitrosation in candidate proteins. Importantly, because these methods will measure contaminating nitrite as well as nitrite formed by S-NO cleavage, measurements with and without mercuric chloride treatment are necessary to assess nitrite levels; as in all of these methods, care must be taken to limit S-NO degradation during sample processing.
Other promising methods for the detection of S-nitrosoproteins include antibody reagents developed to S-nitrosocysteine by using S-nitrosoalbumin as an immunogen.50,51 Some of these antibodies are commercially available, but their specificity has been questioned. Several publications have used these reagents to characterize in vitro S-nitrosated proteins,52 or S-nitrosated proteins in situ in vascular tissue and/or endothelial cells.50,51,53 Although these antibodies have been shown to react with mercuric chloride-sensitive epitopes during immunohistochemical analysis of cells grown in culture or aortic rings,50,51,53 additional studies are necessary to prove the utility of these reagents in identifying unequivocally specific S-nitrosated proteins.
A different approach was used in a recent study that labeled available thiol pools with a biotin compound in NO·-treated and NO·-untreated samples.54 Although this method detects changes in available thiols that can be caused by any thiol oxidation (and not solely S-nitrosothiol formation), it may prove useful as a means to identify proteins with highly reactive thiols.
The recently developed biotin switch method by Jaffrey et al55,56 has been used by us with modification57 and by others to characterize global S-nitrosoprotein changes in endothelial cells.57,58 This method has also been used in numerous studies to follow the specific S-nitrosation of candidate proteins that were first isolated by immunoprecipitation. This elegant method relies on the differing susceptibility of the S-nitroso bond for cleavage compared with other thiol linkages. There are 3 major steps to the procedure: blocking free thiols; cleaving the S-N bond with ascorbic acid; and then blocking the resulting, newly formed thiols with a sulfhydryl-specific biotinylating reagent. The biotin moiety provides a convenient epitope for isolation or detection with antibodies to biotin or steptavidin reagents. Successful application of this method requires complete blocking of free thiols in the first step. Removal of this initial blocking agent is also crucial to avoid blocking ascorbate-sensitive sulfhydryl groups that are generated in the subsequent steps. As shown in the original report,55 coupling of the biotin switch method with proteomic methods, such as 2-dimensional electrophoresis, followed by in-gel tryptic digestion of protein spots, and subsequent mass spectrometry, has allowed for the identification of S-nitrosated proteins. Because of the limitations of mass spectrometry and the lability of the thiol-biotin linkages, this method has not permitted the identification of the actual modified cysteinyl residues in biological samples.
We recently developed a modification of the biotin switch method to follow the formation and localization of S-nitrosoproteins in situ in endothelial cells.57 In our studies, we found it necessary to use 10-fold higher concentration of alkylator, ie, 200 mmol/L methyl methanethiosulfonate (MMTS),57 than in the original published method55 to block free thiols. We also used a higher concentration of ascorbate to cleave the S-N bonds. Because of the highly reactive and specific nature of MMTS compounds for thiols, after reducing S-nitroso bonds, we used a Texas red derivative of MMTS to produce fluorescently tagged proteins that can be detected in situ. A biotinylated form of this compound was used for S-nitrosoprotein isolation and proteomic identification.
Direct confirmation of S-nitrosoproteins by mass spectrometry has only been possible on purified proteins subjected to in vitro modification with NO donors.59,60 Although these methods can detect the NO adduct in modified proteins or peptides, these procedures cannot necessarily identify the cysteinyl residue that is modified by nitrosation because of the lability of the S-NO bond: the S-N bond cleaves at lower energies than more stable peptide bonds. To date, targeted mutagenesis is the only method available to confirm unequivocally the role of specific cysteine residues in S-nitrosation reactions.
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Regulation of S-Nitrosoprotein Formation in Endothelial Cells
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From the earliest studies of protein thiol modification by nitrogen
oxides by our group, it was apparent that S-nitrosoproteins
were of biological importance. Plasma proteins that were modified
in vitro were shown to inhibit platelet activation and to promote
vasodilation in vivo,
61,62 thus suggesting a role for S-nitrosoproteins
in the transport and storage of NO·. Importantly, the
identification of circulating plasma S-nitrosoalbumin and other
S-nitrosoprotein species under normal physiological conditions
supported the notion that susceptible thiols are stably nitrosated
in vivo.
5 After these initial studies, many biological effects
of NO· have been correlated with S-nitrosation of target
proteins, including receptors, enzymes, and transcription factors.
63
It is now widely accepted that S-nitrosoproteins exist in all tissues. Several recent studies have examined the global formation53,57,58,64 and proteome-wide identification of S-nitrosoproteins57,58 in endothelial cells. These studies provide some information regarding the formation and location of S-nitrosproteins in these cells.
The precise relationship of S-nitrosoprotein formation to NOS activity is currently unclear. One study in human umbilical vein endothelial cells found that S-nitrosoprotein pools decreased in response to 12 to 18 hours of incubation with pro-inflammatory and pro-atherogenic stimuli64; however, inhibition of basal NOS activity with NG-monomethyl-L-arginine (L-NMMA) had no effect on detectable S-nitrosoprotein formation until 48 hours of treatment with the NOS inhibitor. This finding is in contrast to whole animal studies that reported NOS inhibitors decreased detectable S-nitrosoproteins within 1 to 2 hours.5,47 Endothelial cell studies suggest that S-nitrosoprotein pools have a half-life of &1 hour (after removal of the NO· source), indicating that cellular S-nitrosoprotein pools are dynamic and sensitive to changes in NO· concentrations and flux.57 Other studies in umbilical vein and arterial endothelial cells have found that NOS inhibitors decreased basal or stimulated S-nitrosoprotein levels.53,57 Global S-nitrosoprotein formation can also be augmented by stimulation of NOS activity by shear stress53 or calcium ionophores.50,57
The global endothelial S-nitrosoprotein pool was found to be sensitive to ascorbate, because pretreatment with ascorbate decreased detectable S-nitrosoproteins.57 This observation is consistent with in vivo data showing an inverse relationship between the levels of cellular ascorbate and levels of S-nitrosoproteins.47 Overall, these findings suggest S-nitrosoprotein formation is redox-sensitive.
In our recent study,57 we also acquired evidence for a central role of mitochondria in protein S-nitrosation: S-nitrosoproteins localized to the mitrochondria or peri-mitochondrial space, and inhibition of mitochondrial respiration or use of rho(0) cells that have greatly diminished numbers of functional mitochondria substantially decreased S-nitrosoprotein formation. The mitochondrial role in S-nitrosoprotein formation may be caused, in part, by its role as a source of superoxide that may promote peroxynitrite generation (Figure 2). Two recent studies showed that chronic stimulation of cells with NO· targets the S-nitrosation of mitochondrial proteins involved in respiration,54,65 including cytochrome c oxidase, a protein previously reported to be modified by NO·.66

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Figure 2. The role of mitochondria in protein S-nitrosation. S-nitrosated proteins are abundantly localized to mitrochondria and the peri-mitrochondrial space. Experimental evidence suggests that pharmacological blockade of electron transport or elimination of mitrochondria drastically reduces the formation of S-nitrosated proteins. The mitochondria are a major source of superoxide, which is, in part, detoxified by antioxidant proteins, such as superoxide dismutase (SOD) followed by further reduction by glutathione peroxidase (GPx). We suggest that some of the superoxide produced by mitochondria can combine with NO to form peroxynitrite, a nitrosating agent. PrSH, protein with free thiol; PrSNO indicates S-nitrosated protein; RSH, low-molecular-weight thiol; RSNO, S-nitrosated thiol; NOS, nitric oxide synthase; mtNOS, resident mitrochondrial NOS; eNOS, endothelial NOS; Arg, arginine; VDAC, voltage-dependent anion channel. Roman numerals indicate mitochondrial complexes (I to IV); Q, coenzyme Q; Cyt c, cytochrome c.
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Proteomic Identification of Endothelial S-Nitrosoproteins
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From the use of the biotin switch method, we and others have
identified a number of S-nitrosated proteins from the proteome
of endothelial cells treated with NO donors.
57,58 These proteins
were not targeted for study a priori but were isolated from
2-dimensional gels and identified by peptide fingerprints and/or
peptide sequencing using mass spectrometry. Many of these proteins
have known reactive thiols that are involved in proteinprotein
interactions or enzymatic functions and, therefore, fit one
of the logical criteria for endogenous targets of S-nitrosation.
This "subproteome" of S-nitrosated targets overlaps with that
of S-thiolated proteins, as S-thiolation may also occur at reactive
cysteines. S-thiolation involves the formation of a disulfide
between a cysteine residue in a protein and a low-molecular-weight
thiol, such as cysteine or glutathione.
67,68 S-glutathiolation,
in particular, has been studied as a protein modification that
is inducible by increased oxidative stress and is capable of
modifying protein function.
69 S-glutathiolation is also considered
a protective event that may prevent irreversible oxidation of
reactive cysteine residues. Some studies show that S-NO formation
may precede S-thiolation; however, S-nitrosation and S-thiolation
can occur at different cysteine residues.
70 The exact relationship
among various forms of cysteine modification is still unclear
and will require precise definition of each of these subproteomes.
In 2 separate reports,57,58 peroxiredoxin, actin, and GAPDH were identified as S-nitrosoproteins. The function of peroxiredoxin relies on an active cysteine during the decomposition of peroxide.71 Actin is known to contain reactive cysteine residues72; actin modification by alkylation73 and S-nitrosation74 at reactive thiols has been previously correlated with alterations in actin function. S-nitrosation of GAPDH has also been shown to inhibit enzyme activity in multiple cells, including endothelial cells.75,76
Using this proteomic approach, other proteins were identified that could potentially play a significant role in NO·-mediated signaling, include ubiquitin-conjugating enzyme (UbcH7)57 and 14 to 33 isoforms.58 UbcH7 S-nitrosation may be important because NO· is known to inhibit proteasomal degradation,77 and a catalytic cysteine (cys86) in UbcH7 is required for this function78; 14 to 33 isoforms are known to play a role in protein signal transduction.58 However, the exact role of a reactive cysteine in these processes is unclear.
The total list of S-nitrosoproteins that have been identified to date is extensive.63 Most of these proteins have been identified in targeted studies involving in vitro S-nitrosation of purified candidate proteins or by analysis of NO release from immunoprecipitated proteins. The latter method may allow for detection of S-nitroso-adducts in proteins that are S-nitrosated at low levels, compared with the proteomic methods; however, it requires pre-selection of candidate proteins. Importantly, one cannot exclude post hoc (ie, after cell lysis) formation of S-nitrosoproteins identified by this conventional methodology. The application of streamlined proteomic methods, such as the use of in-line liquid 2-dimensional chromatographic separation of proteins or peptides,79 may improve recovery of less abundant proteins, reduce artifacts during protein isolation, and increase the ability to identify novel S-nitrosoproteins using the biotin switch method.
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The Effects of S-Nitrosation on Cellular Function
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Several studies have identified S-nitrosoproteins by using the
targeted antibody approach. Many of these candidate proteins
were chosen because they play a role in processes regulated
by NO·. For example, in endothelial cells, NO·
is known to inhibit apoptosis; thus, caspases that control the
apoptotic cascade were studied. Caspase-3, a proapoptotic caspase,
was shown to be S-nitrosated at the active site, cys163, as
well as at other cysteinyl residues by in vitro studies.
59 In
endothelial cells, S-nitrosation at the cys163 was functionally
related to NO·-mediated inhibition of the caspase signaling
cascade.
59,80 In other cell types, NO·-induced S-nitrosation
of caspases was also found to inhibit cytokine-induced programmed
cell death.
81 These data confirm the importance of NO·-mediated
signaling in regulating cell death and provide a mechanism to
explain this effect.
Interesting findings are also emerging concerning the NO·-mediated regulation of NOS activity itself. Exposure to NO· was shown to inhibit the activity of NOS in endothelial cells in a manner that was reversed by thioredoxin/thioredoxin reductase in in vitro assays.82 More recent studies found that both eNOS and iNOS are susceptible to NO·-induced thiol modification,8385 suggesting a possible feedback mechanism to control NOS activity. NO·-mediated inhibition can occur by endogenous stimulation of NO· production, or by the use of exogenous NO· generators.8386 The susceptible cysteinyl residues are part of the zinc-tetra-thiolate cluster, which functions to stabilize NOS dimers. S-nitrosation at these cysteines was shown to interfere with NOS dimerization in vitro and in cell culture85,86 and to decrease enzyme activity. In endothelial cells, the S-nitrosation of eNOS showed a dynamic pattern that was inversely related to eNOS activity84: in resting cells, during states of eNOS inactivity, eNOS was S-nitrosated; activation of NOS activity corresponded with a loss of S-nitrosation, which returned to the basal S-nitroso-state within 15-minutes after insulin activation and within 60 minutes after VEGF activation.
Other accessory proteins that modulate NOS activity are functionally inactivated by S-nitrosation. Thiol S-nitrosation of Hsp90 apparently reduces ATPase activity of this protein and, in vitro, reduces the ability of Hsp90 to potentiate eNOS function.87 Similarly, argininosuccinate synthetase (AS) is inactivated by S-nitrosation at cys132. AS is involved in the regeneration of L-arginine from the NOS product L-citrulline. Under basal conditions, S-nitroso-AS was not detected, but the formation of S-nitroso-AS was stimulated after lipopolysaccharide stimulation of vascular smooth muscle cells and in tissues after in vivo lipopolysaccharide induction of iNOS. AS production of L-arginine may be especially important for maintaining the high flux activity of iNOS. Taken together, these data suggest that NO· modification of susceptible thiols may reduce NOS activity directly, and S-nitrosation of accessory proteins may serve to regulate NOS function indirectly. Nitrosation may also provide a negative feedback mechanism for the transcriptional stimulation of the eNOS gene accompanying shear stress.88 Shear stress causes an NF
B-dependent increase in eNOS transcription, followed by an eNOS-dependent accumulation of S-nitrosated p50. S-nitrosation of the NF
B subunit correlates with a decrease in nuclear localization of NF
B-dependent, thereby decreasing transcription.
Another important target for S-nitrosation is thioredoxin. Thioredoxin is a small protein that mediates the actions of many redox-sensitive proteins directly or indirectly by reducing those proteins or accessory proteins by mechanisms involving a Cys-Gly-Pro-Cys active core. Overall there are 5 cysteinyl residues in thioredoxin. Cys69, one of the cysteinyl residues outside the active core, is susceptible to S-nitrosation. S-nitrosation of thioredoxin has been associated with activation of thioredoxin and reduction of intracellular reactive oxygen species in endothelial cells.89,90 Thioredoxin is known to interact with many proteins by disulfide interactions. In kidney cells, S-nitrosation of thioredoxin reduced the association between thioredoxin and apoptosis signal regulated kinase 1, and promoted an apoptotic program in these cells. These consequences of S-nitrosation may be cell typespecific; however, it is likely that the status of thiol-modification may affect many of thioredoxins proteinprotein interactions.
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Conclusions and Future Avenues
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Many biological effects of NO· are mediated through cGMP-independent
pathways via posttranslational modification of proteins by S-nitrosation
of target proteins, including receptors, enzymes, and transcription
factors. Importantly, there is evidence to suggest that S-nitrosation
can occur under physiological conditions, and that it is a reversible
process that may modulate enzyme activities. Many studies have
defined the particular cysteinyl residues involved in S-nitrosation
and the role of these changes in cellular function by analysis
of candidate proteins. These studies, including those cited
in this review, have provided important insights into the role
of S-nitroso-modification in regulating some of the cellular
effects of NO·; however, there is much that is unknown
about NO· -mediated signaling. In proteomics, no a priori
selection of targets is made; instead, proteins are selected
by other criteria. The development of the biotin switch method
has allowed for the substitution of a thiol-selective biotin
moiety in place of thiol-specific nitroso-adducts, providing
an indirect method to select for S-nitrosoproteins that can
be identified through proteomic methods using mass spectrometry.
In practice, this method has allowed for the identification
of a modest number of proteins, some of which have susceptible
cysteinyl residues that could be a target for S-nitrosation.
Currently, sensitivity is one issue that limits the identification
of S-nitrosoproteins by available proteomic means. Application
of new techniques, such as liquid 2-dimensional chromatography
performed in line with mass spectrometry, should allow for identification
of additional S-nitrosoproteins in endothelial cells and in
vascular tissue samples. These data will help in further understanding
the biological effects of NO· in health and disease.
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Acknowledgments
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This work was supported by NIH grants HL59876, HL55993, HL61828,
HV28178, and HL81587. The authors thank Stephanie Tribuna for
assistance with the preparation of this manuscript.
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Footnotes
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Consulting Editor for this article was Steven R. Lentz, MD,
PhD, Department of Internal Medicine, University of Iowa.
Received January 6, 2006;
revision received March 3, 2006;
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References
|
|---|
- Ignarro LJ, Buga GM, Wood KS, Byrns RE, Chaudhuri G. Endothelium-derived relaxing factor produced and released from artery and vein is nitric oxide. Proc Natl Acad Sci U S A. 1987; 84: 92659269.[Abstract/Free Full Text]
- Palmer RM, Ferrige AG, Moncada S. Nitric oxide release accounts for the biological activity of endothelium-derived relaxing factor. Nature. 1987; 327: 524526.[CrossRef][Medline]
[Order article via Infotrieve]
- Ignarro LJ, Degnan JN, Baricos WH, Kadowitz PJ, Wolin MS. Activation of purified guanylate cyclase by nitric oxide requires heme. Comparison of heme-deficient, heme-reconstituted and heme-containing forms of soluble enzyme from bovine lung. Biochim Biophys Acta. 1982; 718: 4959.[Medline]
[Order article via Infotrieve]
- Denninger JW, Marletta MA. Guanylate cyclase and the.NO/cGMP signaling pathway. Biochim Biophys Acta. 1999; 1411: 334350.[Medline]
[Order article via Infotrieve]
- Stamler JS, Jaraki O, Osborne J, Simon DI, Keaney J, Vita J, Singel D, Valeri CR, Loscalzo J. Nitric oxide circulates in mammalian plasma primarily as an S-nitroso adduct of serum albumin. Proc Natl Acad Sci U S A. 1992; 89: 76747677.[Abstract/Free Full Text]
- Gow AJ, Farkouh CR, Munson DA, Posencheg MA, Ischiropoulos H. Biological significance of nitric oxide-mediated protein modifications. Am J Physiol Lung Cell Mol Physiol. 2004; 287: L262L268.[Abstract/Free Full Text]
- Ischiropoulos H. Biological tyrosine nitration: a pathophysiological function of nitric oxide and reactive oxygen species. Arch Biochem Biophys. 1998; 356: 111.[CrossRef][Medline]
[Order article via Infotrieve]
- Ischiropoulos H. Biological selectivity and functional aspects of protein tyrosine nitration. Biochem Biophys Res Commun. 2003; 305: 776783.[CrossRef][Medline]
[Order article via Infotrieve]
- Stuehr DJ, Kwon NS, Nathan CF, Griffith OW, Feldman PL, Wiseman J. N omega-hydroxy-L-arginine is an intermediate in the biosynthesis of nitric oxide from L-arginine. J Biol Chem. 1991; 266: 62596263.[Abstract/Free Full Text]
- Griffith OW, Stuehr DJ. Nitric oxide synthases: properties and catalytic mechanism. Annu Rev Physiol. 1995; 57: 707736.[CrossRef][Medline]
[Order article via Infotrieve]
- Alderton WK, Cooper CE, Knowles RG. Nitric oxide synthases: structure, function and inhibition. Biochem J. 2001; 357: 593615.[CrossRef][Medline]
[Order article via Infotrieve]
- Busse R, Mulsch A. Calcium-dependent nitric oxide synthesis in endothelial cytosol is mediated by calmodulin. FEBS Lett. 1990; 265: 133136.[CrossRef][Medline]
[Order article via Infotrieve]
- Abu-Soud HM, Yoho LL, Stuehr DJ. Calmodulin controls neuronal nitric-oxide synthase by a dual mechanism. Activation of intra- and interdomain electron transfer. J Biol Chem. 1994; 269: 3204732050.[Abstract/Free Full Text]
- Salerno JC, Harris DE, Irizarry K, Patel B, Morales AJ, Smith SM, Martasek P, Roman LJ, Masters BS, Jones CL, Weissman BA, Lane P, Liu Q, Gross SS. An autoinhibitory control element defines calcium-regulated isoforms of nitric oxide synthase. J Biol Chem. 1997; 272: 2976929777.[Abstract/Free Full Text]
- Wu KK. Inducible cyclooxygenase and nitric oxide synthase. Adv Pharmacol. 1995; 33: 179207.[Medline]
[Order article via Infotrieve]
- Esaki T, Hayashi T, Muto E, Yamada K, Kuzuya M, Iguchi A. Expression of inducible nitric oxide synthase in T lymphocytes and macrophages of cholesterol-fed rabbits. Atherosclerosis. 1997; 128: 3946.[CrossRef][Medline]
[Order article via Infotrieve]
- Teng X, Zhang H, Snead C, Catravas JD. Molecular mechanisms of iNOS induction by IL-1 beta and IFN-gamma in rat aortic smooth muscle cells. Am J Physiol Cell Physiol. 2002; 282: C144C152.[Abstract/Free Full Text]
- Wink DA, Nims RW, Darbyshire JF, Christodoulou D, Hanbauer I, Cox GW, Laval F, Laval J, Cook JA, Krishna MC, et al. Reaction kinetics for nitrosation of cysteine and glutathione in aerobic nitric oxide solutions at neutral pH. Insights into the fate and physiological effects of intermediates generated in the NO/O2 reaction. Chem Res Toxicol. 1994; 7: 519525.[CrossRef][Medline]
[Order article via Infotrieve]
- Kharitonov VG, Sundquist AR, Sharma VS. Kinetics of nitrosation of thiols by nitric oxide in the presence of oxygen. J Biol Chem. 1995; 270: 2815828164.[Abstract/Free Full Text]
- Wink DA, Osawa Y, Darbyshire JF, Jones CR, Eshenaur SC, Nims RW. Inhibition of cytochromes P450 by nitric oxide and a nitric oxide-releasing agent. Arch Biochem Biophys. 1993; 300: 115123.[CrossRef][Medline]
[Order article via Infotrieve]
- Nedospasov A, Rafikov R, Beda N, Nudler E. An autocatalytic mechanism of protein nitrosylation. Proc Natl Acad Sci U S A. 2000; 97: 1354313548.[Abstract/Free Full Text]
- Jourdheuil D, Jourdheuil FL, Feelisch M. Oxidation and nitrosation of thiols at low micromolar exposure to nitric oxide. Evidence for a free radical mechanism. J Biol Chem. 2003; 278: 1572015726.[Abstract/Free Full Text]
- Heo J, Campbell SL. Mechanism of p21Ras S-nitrosylation and kinetics of nitric oxide-mediated guanine nucleotide exchange. Biochemistry. 2004; 43: 23142322.[CrossRef][Medline]
[Order article via Infotrieve]
- van der Vliet A, Hoen PA, Wong PS, Bast A, Cross CE. Formation of S-nitrosothiols via direct nucleophilic nitrosation of thiols by peroxynitrite with elimination of hydrogen peroxide. J Biol Chem. 1998; 273: 3025530262.[Abstract/Free Full Text]
- Gow AJ, Buerk DG, Ischiropoulos H. A novel reaction mechanism for the formation of S-nitrosothiol in vivo. J Biol Chem. 1997; 272: 28412845.[Abstract/Free Full Text]
- Vanin AF, Malenkova IV, Serezhenkov VA. Iron catalyzes both decomposition and synthesis of S-nitrosothiols: optical and electron paramagnetic resonance studies. Nitric Oxide. 1997; 1: 191203.[CrossRef][Medline]
[Order article via Infotrieve]
- Scharfstein JS, Keaney JF Jr, Slivka A, Welch GN, Vita JA, Stamler JS, Loscalzo J. In vivo transfer of nitric oxide between a plasma protein-bound reservoir and low molecular weight thiols. J Clin Invest. 1994; 94: 14321439.[Medline]
[Order article via Infotrieve]
- Liu Z, Rudd MA, Freedman JE, Loscalzo J. S-Transnitrosation reactions are involved in the metabolic fate and biological actions of nitric oxide. J Pharmacol Exp Ther. 1998; 284: 526534.[Abstract/Free Full Text]
- Crane MS, Ollosson R, Moore KP, Rossi AG, Megson IL. Novel role for low molecular weight plasma thiols in nitric oxide-mediated control of platelet function. J Biol Chem. 2002; 277: 4685846863.[Abstract/Free Full Text]
- Zai A, Rudd MA, Scribner AW, Loscalzo J. Cell-surface protein disulfide isomerase catalyzes transnitrosation and regulates intracellular transfer of nitric oxide. J Clin Invest. 1999; 103: 393399.[Medline]
[Order article via Infotrieve]
- Ramachandran N, Root P, Jiang XM, Hogg PJ, Mutus B. Mechanism of transfer of NO from extracellular S-nitrosothiols into the cytosol by cell-surface protein disulfide isomerase. Proc Natl Acad Sci U S A. 2001; 98: 95399544.[Abstract/Free Full Text]
- Li S, Whorton AR. Identification of stereoselective transporters for S-nitroso-L-cysteine: role of LAT1 and LAT2 in biological activity of S-nitrosothiols. J Biol Chem. 2005; 280: 2010220110.[Abstract/Free Full Text]
- Zhang Y, Hogg N. The mechanism of transmembrane S-nitrosothiol transport. Proc Natl Acad Sci U S A. 2004; 101: 78917896.[Abstract/Free Full Text]
- Jensen DE, Belka GK, Du Bois GC. S-Nitrosoglutathione is a substrate for rat alcohol dehydrogenase class III isoenzyme. Biochem J. 1998; 331 (Pt 2): 659668.[Medline]
[Order article via Infotrieve]
- Haqqani AS, Do SK, Birnboim HC. The role of a formaldehyde dehydrogenase-glutathione pathway in protein S-nitrosation in mammalian cells. Nitric Oxide. 2003; 9: 172181.[CrossRef][Medline]
[Order article via Infotrieve]
- Lane P, Hao G, Gross SS. S-nitrosylation is emerging as a specific and fundamental posttranslational protein modification: head-to-head comparison with O-phosphorylation. Sci STKE. 2001; 2001: RE1.[Medline]
[Order article via Infotrieve]
- Fang M, Jaffrey SR, Sawa A, Ye K, Luo X, Snyder SH. Dexras1: a G protein specifically coupled to neuronal nitric oxide synthase via CAPON. Neuron. 2000; 28: 183193.[CrossRef][Medline]
[Order article via Infotrieve]
- Lakshmi VM, Nauseef WM, Zenser TV. Myeloperoxidase potentiates nitric oxide-mediated nitrosation. J Biol Chem. 2005; 280: 17461753.[Abstract/Free Full Text]
- Baldus S, Heitzer T, Eiserich JP, Lau D, Mollnau H, Ortak M, Petri S, Goldmann B, Duchstein HJ, Berger J, Helmchen U, Freeman BA, Meinertz T, Munzel T. Myeloperoxidase enhances nitric oxide catabolism during myocardial ischemia and reperfusion. Free Radic Biol Med. 2004; 37: 902911.[CrossRef][Medline]
[Order article via Infotrieve]
- Singh RJ, Hogg N, Joseph J, Kalyanaraman B. Mechanism of nitric oxide release from S-nitrosothiols. J Biol Chem. 1996; 271: 1859618603.[Abstract/Free Full Text]
- Smith JN, Dasgupta TP. Kinetics and mechanism of the decomposition of S-nitrosoglutathione by l-ascorbic acid and copper ions in aqueous solution to produce nitric oxide. Nitric Oxide. 2000; 4: 5766.[CrossRef][Medline]
[Order article via Infotrieve]
- Dasgupta TP, Smith JN. Reactions of S-nitrosothiols with L-ascorbic acid in aqueous solution. Methods Enzymol. 2002; 359: 219229.[Medline]
[Order article via Infotrieve]
- Doctor A, Platt R, Sheram ML, Eischeid A, McMahon T, Maxey T, Doherty J, Axelrod M, Kline J, Gurka M, Gow A, Gaston B. Hemoglobin conformation couples erythrocyte S-nitrosothiol content to O2 gradients. Proc Natl Acad Sci U S A. 2005; 102: 57095714.[Abstract/Free Full Text]
- Yang BK, Vivas EX, Reiter CD, Gladwin MT. Methodologies for the sensitive and specific measurement of S-nitrosothiols, iron-nitrosyls, and nitrite in biological samples. Free Radic Res. 2003; 37: 110.[Medline]
[Order article via Infotrieve]
- Zhang Y, Hogg N. S-Nitrosothiols: cellular formation and transport. Free Radic Biol Med. 2005; 38: 831838.[CrossRef][Medline]
[Order article via Infotrieve]
- Jourdheuil D, Jourdheuil FL, Lowery AM, Hughes J, Grisham MB. Detection of nitrosothiols and other nitroso species in vitro and in cells. Methods Enzymol. 2005; 396: 118131.[CrossRef][Medline]
[Order article via Infotrieve]
- Bryan NS, Rassaf T, Maloney RE, Rodriguez CM, Saijo F, Rodriguez JR, Feelisch M. Cellular targets and mechanisms of nitros(yl)ation: an insight into their nature and kinetics in vivo. Proc Natl Acad Sci U S A. 2004; 101: 43084313.[Abstract/Free Full Text]
- Tarpey MM, Wink DA, Grisham MB. Methods for detection of reactive metabolites of oxygen and nitrogen: in vitro and in vivo considerations. Am J Physiol Regul Integr Comp Physiol. 2004; 286: R431R444.[Abstract/Free Full Text]
- Wink DA, Kim S, Coffin D, Cook JC, Vodovotz Y, Chistodoulou D, Jourdheuil D, Grisham MB. Detection of S-nitrosothiols by fluorometric and colorimetric methods. Methods Enzymol. 1999; 301: 201211.[CrossRef][Medline]
[Order article via Infotrieve]
- Gow AJ, Chen Q, Hess DT, Day BJ, Ischiropoulos H, Stamler JS. Basal and stimulated protein S-nitrosylation in multiple cell types and tissues. J Biol Chem. 2002; 277: 96379640.[Abstract/Free Full Text]
- Alencar JL, Lobysheva I, Geffard M, Sarr M, Schott C, Schini-Kerth VB, Nepveu F, Stoclet JC, Muller B. Role of S-nitrosation of cysteine residues in long-lasting inhibitory effect of nitric oxide on arterial tone. Mol Pharmacol. 2003; 63: 11481158.[Abstract/Free Full Text]
- Kuo WN, Kocis JM. Nitration/S-nitrosation of proteins by peroxynitrite-treatment and subsequent modification by glutathione S-transferase and glutathione peroxidase. Mol Cell Biochem. 2002; 233: 5763.[CrossRef][Medline]
[Order article via Infotrieve]
- Hoffmann J, Dimmeler S, Haendeler J. Shear stress increases the amount of S-nitrosylated molecules in endothelial cells: important role for signal transduction. FEBS Lett. 2003; 551: 153158.[CrossRef][Medline]
[Order article via Infotrieve]
- Ramachandran A, Ceaser E, Darley-Usmar VM. Chronic exposure to nitric oxide alters the free iron pool in endothelial cells: role of mitochondrial respiratory complexes and heat shock proteins. Proc Natl Acad Sci U S A. 2004; 101: 384389.[Abstract/Free Full Text]
- Jaffrey SR, Erdjument-Bromage H, Ferris CD, Tempst P, Snyder SH. Protein S-nitrosylation: a physiological signal for neuronal nitric oxide. Nat Cell Biol. 2001; 3: 193197.[CrossRef][Medline]
[Order article via Infotrieve]
- Jaffrey SR, Snyder SH. The biotin switch method for the detection of S-nitrosylated proteins. Sci STKE. 2001; 2001: PL1.[Medline]
[Order article via Infotrieve]
- Yang Y, Loscalzo J. S-nitrosoprotein formation and localization in endothelial cells. Proc Natl Acad Sci U S A. 2005; 102: 117122.[Abstract/Free Full Text]
- Martinez-Ruiz A, Lamas S. Detection and proteomic identification of S-nitrosylated proteins in endothelial cells. Arch Biochem Biophys. 2004; 423: 192199.[CrossRef][Medline]
[Order article via Infotrieve]
- Zech B, Wilm M, van Eldik R, Brune B. Mass spectrometric analysis of nitric oxide-modified caspase-3. J Biol Chem. 1999; 274: 2093120936.[Abstract/Free Full Text]
- Hao G, Xie L, Gross SS. Argininosuccinate synthetase is reversibly inactivated by S-nitrosylation in vitro and in vivo. J Biol Chem. 2004; 279: 3619236200.[Abstract/Free Full Text]
- Stamler JS, Simon DI, Osborne JA, Mullins ME, Jaraki O, Michel T, Singel DJ, Loscalzo J. S-nitrosylation of proteins with nitric oxide: synthesis and characterization of biologically active compounds. Proc Natl Acad Sci U S A. 1992; 89: 444448.[Abstract/Free Full Text]
- Keaney JF Jr, Simon DI, Stamler JS, Jaraki O, Scharfstein J, Vita JA, Loscalzo J. NO forms an adduct with serum albumin that has endothelium-derived relaxing factor-like properties. J Clin Invest. 1993; 91: 15821589.[Medline]
[Order article via Infotrieve]
- Hess DT, Matsumoto A, Kim SO, Marshall HE, Stamler JS. Protein S-nitrosylation: purview and parameters. Nat Rev Mol Cell Biol. 2005; 6: 150166.[CrossRef][Medline]
[Order article via Infotrieve]
- Hoffmann J, Haendeler J, Zeiher AM, Dimmeler S. TNFalpha and oxLDL reduce protein S-nitrosylation in endothelial cells. J Biol Chem. 2001; 276: 4138341387.[Abstract/Free Full Text]
- Zhang J, Jin B, Li L, Block ER, Patel JM. Nitric oxide-induced persistent inhibition and nitrosylation of active site cysteine residues of mitochondrial cytochrome-c oxidase in lung endothelial cells. Am J Physiol Cell Physiol. 2005; 288: C840C849.[Abstract/Free Full Text]
- Clementi E, Brown GC, Feelisch M, Moncada S. Persistent inhibition of cell respiration by nitric oxide: crucial role of S-nitrosylation of mitochondrial complex I and protective action of glutathione. Proc Natl Acad Sci U S A. 1998; 95: 76317636.[Abstract/Free Full Text]
- Biswas S, Chida AS, Rahman I. Redox modifications of protein-thiols: Emerging roles in cell signaling. Biochem Pharmacol. 2006; 71: 551564.[CrossRef][Medline]
[Order article via Infotrieve]
- Niture SK, Velu CS, Bailey NI, Srivenugopal KS. S-thiolation mimicry: quantitative and kinetic analysis of redox status of protein cysteines by glutathione-affinity chromatography. Arch Biochem Biophys. 2005; 444: 174184.[Medline]
[Order article via Infotrieve]
- Adachi T, Pimentel DR, Heibeck T, Hou X, Lee YJ, Jiang B, Ido Y, Cohen RA. S-glutathiolation of Ras mediates redox-sensitive signaling by angiotensin II in vascular smooth muscle cells. J Biol Chem. 2004; 279: 2985729862.[Abstract/Free Full Text]
- Mallis RJ, Buss JE, Thomas JA. Oxidative modification of H-ras: S-thiolation and S-nitrosylation of reactive cysteines. Biochem J. 2001; 355: 145153.[CrossRef][Medline]
[Order article via Infotrieve]
- Wood ZA, Schroder E, Robin Harris J, Poole LB. Structure, mechanism and regulation of peroxiredoxins. Trends Biochem Sci. 2003; 28: 3240.[CrossRef][Medline]
[Order article via Infotrieve]
- Loscalzo J, Reed GH. Spectroscopic studies of actin-metal-nucleotide complexes. Biochemistry. 1976; 15: 54075413.[Medline]
[Order article via Infotrieve]
- Iwamoto Y, Tamura M, Nakatsuka K, Yamanouchi U. Influence of sulfhydryl agents on cytoskeleton in cultured human trabecular cells. Jpn J Ophthalmol. 1989; 33: 318326.[Medline]
[Order article via Infotrieve]
- Dalle-Donne I, Milzani A, Giustarini D, Di Simplicio P, Colombo R, Rossi R. S-NO-actin: S-nitrosylation kinetics and the effect on isolated vascular smooth muscle. J Muscle Res Cell Motil. 2000; 21: 171181.[CrossRef][Medline]
[Order article via Infotrieve]
- Molina y Vedia L, McDonald B, Reep B, Brune B, Di Silvio M, Billiar TR, Lapetina EG. Nitric oxide-induced S-nitrosylation of glyceraldehyde-3-phosphate dehydrogenase inhibits enzymatic activity and increases endogenous ADP-ribosylation. J Biol Chem. 1992; 267: 2492924932.